PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_504223g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 478aa    MW: 52523.5 Da    PI: 6.6758
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_504223g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.40.000143644021255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L++l+ +      +K + a++L +A+ YIk Lq
  MA_504223g0010 364 RKEKLGDRITALQQLVSPF-----GKTDTASVLLEAIGYIKFLQ 402
                     677888999*******998.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.674352401IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-11362416IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.58E-6362406No hitNo description
SMARTSM003530.0056363407IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-8366410IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    Send to blast
MESTNLDHQN VGDHSGSLID SSVQMGSFGG VPDTHVWRQD FLLDNGSNDQ NMQNLQNNFP  60
PHLTEVLCTS RPLSQDELMN RPSDQSHLTK REEISSGWEL RSHLRSNFQG EDSINVSNNI  120
TAGKQQIPSL PNYSLQLMDD RLQNTCTISD IGSWSLSPSS FTHTGLDMPL LPHYHMANVK  180
EEFIPMANYS TSGVPSRILQ GFAVTEPYKS NESVYSTFLE PHGNKSMAKA QHLGPMIADH  240
HDYNIAGHGF FPPIPSKHSP GVVTFGSSSC MSMPVLDFLA SKPSDIRLQG AHSSSALNYS  300
QDGKSKLHTG PQNRATLQGL GHEGPGTTSE PKRRSSTGHE NTMDASFKRP RMESNSTLPA  360
FKVRKEKLGD RITALQQLVS PFGKTDTASV LLEAIGYIKF LQEQVRVLSM PYLKTGCTST  420
TQGDQKGWGS SEQQESNESK QDLRSRGLCL VPVSCTLHVA NDTIGADFWS PSLGGTYR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP13421337
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.34e-38bHLH family protein